PSI PepcDB

PepcDB News

November 23, 2009:

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November 16, 2009:

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November 09, 2009:

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November 02, 2009:

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October 26, 2009:

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October 19, 2009:

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October 05, 2009:

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September 28, 2009:

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September 21, 2009:

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September 14, 2009:

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September 08, 2009:

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August 31, 2009:

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August 24, 2009:

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August 17, 2009:

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August 10, 2009:

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August 04, 2009:

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August 03, 2009:

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July 27, 2009:

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July 20, 2009:

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July 13, 2009:

Two data files are available for download:
- Status History of Experimental trials with dates of cloning, expression, purification, etc.
- List of Expression Trials in PepcDB with information about expression system, host, and expression vector.
Please visit the PepcDB download directory.

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July 06, 2009:

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June 29, 2009:

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June 23, 2009:

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June 22, 2009:

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June 08, 2009:

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June 01, 2009:

Two new centers deposited data to the database:
- CSGID(Center for Structural Genomics of Infectious Disease): http://www.csgid.org/

- NYCOMPS(New York Consortium on Membrane Protein Structure): http://www.nycomps.org/



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May 25, 2009:

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May 18, 2009:

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May 11, 2009:

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May 04, 2009:

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April 20, 2009:

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April 13, 2009:

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The protocol keyword search option is modified to search with exact phrases or specific words. The phrases and words can be grouped (...) and searched with conjunction(AND) or disjuction(OR) operators. If boolean operators are not provided the search will be performed with "AND" operator. To search with exact phrases please include your sentence into the double quotes, example "cell free expression".

April 06, 2009:

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March 30, 2009:

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March 23, 2009:

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March 16, 2009:

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March 09, 2009:

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March 02, 2009:

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February 23, 2009:

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February 16, 2009:

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February 09, 2009:

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February 02, 2009:

"Target Status" query option is added to PepcDB search form. "Target Status" represents the current experimental status of a target. This is different from query options "Current Status" and "Any Status in History" which represent status information of specific experiments (trials) associated with a target.

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January 26, 2009:

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January 05, 2009:

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December 29, 2008:

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December 22, 2008:

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December 15, 2008:

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December 08, 2008:

PepcDB schema update:
The schema is incremented to version 3.1. Addtional data items are added to <targetSequence> including proteinName, url, remark, sourceOrganism, and databaseRefList. Please note that all new data items are optional. This modification is to better accommodate protein complexes in the PepcDB.

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December 01, 2008:

CHTSB (Center for High-Throughput Structural Biology) deposited data to PepcDB including 14 experimental protocols. For more information about the CHTSB please visit the web site: http://www.chtsb.org/

PepcDB experimental protocol statistics is now available in tabulated format. Please visit PepcDB Statistic site to see what type of protocols and how many protocols contributed by Structural Genomics centers.

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November 24, 2008:

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November 17, 2008:

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November 10, 2008:

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October 29, 2008:

SGX Pharmaceutecals (SGX) deposited the target list to TargetDB. These data are from SGX collaboration with the Cystic Fibrosis Foundation